Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-588 in GCT Seminoma Korkola Cluster 30 Table contains all genes in the GCT Seminoma Korkola cluster number 30. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-588 5879 RAC1 ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) [Source:HGNC Symbol;Acc:9801] zzz999 9697 TRAM2 translocation associated membrane protein 2 [Source:HGNC Symbol;Acc:16855] T 840 CASP7 caspase 7, apoptosis-related cysteine peptidase [Source:HGNC Symbol;Acc:1508] zzz999 29887 SNX10 sorting nexin 10 [Source:HGNC Symbol;Acc:14974] zzz999 6448 SGSH N-sulfoglucosamine sulfohydrolase [Source:HGNC Symbol;Acc:10818] zzz999 2202 EFEMP1 EGF containing fibulin-like extracellular matrix protein 1 [Source:HGNC Symbol;Acc:3218] zzz999 8544 PIR pirin (iron-binding nuclear protein) [Source:HGNC Symbol;Acc:30048] zzz999 3915 LAMC1 laminin, gamma 1 (formerly LAMB2) [Source:HGNC Symbol;Acc:6492] zzz999 23151 GRAMD4 GRAM domain containing 4 [Source:HGNC Symbol;Acc:29113] T 4668 NAGA N-acetylgalactosaminidase, alpha- [Source:HGNC Symbol;Acc:7631] zzz999 1201 CLN3 ceroid-lipofuscinosis, neuronal 3 [Source:HGNC Symbol;Acc:2074] zzz999 27131 SNX5 sorting nexin 5 [Source:HGNC Symbol;Acc:14969] zzz999 8611 PPAP2A phosphatidic acid phosphatase type 2A [Source:HGNC Symbol;Acc:9228] zzz999 27097 TAF5L TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa [Source:HGNC Symbol;Acc:17304] zzz999 57178 ZMIZ1 zinc finger, MIZ-type containing 1 [Source:HGNC Symbol;Acc:16493] T 1124 CHN2 chimerin (chimaerin) 2 [Source:HGNC Symbol;Acc:1944] T 79590 MRPL24 mitochondrial ribosomal protein L24 [Source:HGNC Symbol;Acc:14037] zzz999 9732 DOCK4 dedicator of cytokinesis 4 [Source:HGNC Symbol;Acc:19192] zzz999 4017 LOXL2 lysyl oxidase-like 2 [Source:HGNC Symbol;Acc:6666] T 57192 MCOLN1 mucolipin 1 [Source:HGNC Symbol;Acc:13356] zzz999 10924 SMPDL3A sphingomyelin phosphodiesterase, acid-like 3A [Source:HGNC Symbol;Acc:17389] zzz999 6383 SDC2 syndecan 2 [Source:HGNC Symbol;Acc:10659] zzz999 79762 C1orf115 chromosome 1 open reading frame 115 [Source:HGNC Symbol;Acc:25873] zzz999 55177 FAM82A2 family with sequence similarity 82, member A2 [Source:HGNC Symbol;Acc:25550] zzz999 23423 TMED3 transmembrane emp24 protein transport domain containing 3 [Source:HGNC Symbol;Acc:28889] zzz999 2783 GNB2 guanine nucleotide binding protein (G protein), beta polypeptide 2 [Source:HGNC Symbol;Acc:4398] zzz999 3275 PRMT2 protein arginine methyltransferase 2 [Source:HGNC Symbol;Acc:5186] T 54867 TMEM214 transmembrane protein 214 [Source:HGNC Symbol;Acc:25983] T 64114 TMBIM1 transmembrane BAX inhibitor motif containing 1 [Source:HGNC Symbol;Acc:23410] T 5351 PLOD1 procollagen-lysine 1, 2-oxoglutarate 5-dioxygenase 1 [Source:HGNC Symbol;Acc:9081] zzz999 4734 NEDD4 neural precursor cell expressed, developmentally down-regulated 4 [Source:HGNC Symbol;Acc:7727] T 7094 TLN1 talin 1 [Source:HGNC Symbol;Acc:11845] zzz999 87 ACTN1 actinin, alpha 1 [Source:HGNC Symbol;Acc:163] zzz999 55379 LRRC59 leucine rich repeat containing 59 [Source:HGNC Symbol;Acc:28817] zzz999 10577 NPC2 Niemann-Pick disease, type C2 [Source:HGNC Symbol;Acc:14537] T 2802 GOLGA3 golgin A3 [Source:HGNC Symbol;Acc:4426] T 29109 FHOD1 formin homology 2 domain containing 1 [Source:HGNC Symbol;Acc:17905] zzz999 22818 COPZ1 coatomer protein complex, subunit zeta 1 [Source:HGNC Symbol;Acc:2243] zzz999 23474 ETHE1 ethylmalonic encephalopathy 1 [Source:HGNC Symbol;Acc:23287] zzz999 9846 GAB2 GRB2-associated binding protein 2 [Source:HGNC Symbol;Acc:14458] T 161582 DYX1C1 dyslexia susceptibility 1 candidate 1 [Source:HGNC Symbol;Acc:21493] zzz999 51278 IER5 immediate early response 5 [Source:HGNC Symbol;Acc:5393] zzz999 9791 PTDSS1 phosphatidylserine synthase 1 [Source:HGNC Symbol;Acc:9587] zzz999 309 ANXA6 annexin A6 [Source:HGNC Symbol;Acc:544] T 54504 CPVL carboxypeptidase, vitellogenic-like [Source:HGNC Symbol;Acc:14399] zzz999 3728 JUP junction plakoglobin [Source:HGNC Symbol;Acc:6207] zzz999 23646 PLD3 phospholipase D family, member 3 [Source:HGNC Symbol;Acc:17158] zzz999 8623 ASMTL acetylserotonin O-methyltransferase-like [Source:HGNC Symbol;Acc:751] zzz999 4924 NUCB1 nucleobindin 1 [Source:HGNC Symbol;Acc:8043] zzz999 1050 CEBPA CCAAT/enhancer binding protein (C/EBP), alpha [Source:HGNC Symbol;Acc:1833] zzz999 30845 EHD3 EH-domain containing 3 [Source:HGNC Symbol;Acc:3244] T 1476 CSTB cystatin B (stefin B) [Source:HGNC Symbol;Acc:2482] zzz999 10084 PQBP1 polyglutamine binding protein 1 [Source:HGNC Symbol;Acc:9330] zzz999 5774 PTPN3 protein tyrosine phosphatase, non-receptor type 3 [Source:HGNC Symbol;Acc:9655] zzz999 8934 RAB7L1 RAB7, member RAS oncogene family-like 1 [Source:HGNC Symbol;Acc:9789] T 6249 CLIP1 CAP-GLY domain containing linker protein 1 [Source:HGNC Symbol;Acc:10461] T 3304 HSPA1B heat shock 70kDa protein 1B [Source:HGNC Symbol;Acc:5233] zzz999 5339 PLEC plectin [Source:HGNC Symbol;Acc:9069] zzz999 11261 zzz999 Calcium-binding protein p22 [Source:UniProtKB/Swiss-Prot;Acc:Q99653] zzz999 5476 CTSA cathepsin A [Source:HGNC Symbol;Acc:9251] zzz999 9818 NUPL1 nucleoporin like 1 [Source:HGNC Symbol;Acc:20261] T 23503 ZFYVE26 zinc finger, FYVE domain containing 26 [Source:HGNC Symbol;Acc:20761] T 23328 SASH1 SAM and SH3 domain containing 1 [Source:HGNC Symbol;Acc:19182] T 50813 COPS7A COP9 constitutive photomorphogenic homolog subunit 7A (Arabidopsis) [Source:HGNC Symbol;Acc:16758] zzz999 55033 FKBP14 FK506 binding protein 14, 22 kDa [Source:HGNC Symbol;Acc:18625] T 66008 TRAK2 trafficking protein, kinesin binding 2 [Source:HGNC Symbol;Acc:13206] zzz999 64236 PDLIM2 PDZ and LIM domain 2 (mystique) [Source:HGNC Symbol;Acc:13992] T 5836 PYGL phosphorylase, glycogen, liver [Source:HGNC Symbol;Acc:9725] zzz999 10159 ATP6AP2 ATPase, H+ transporting, lysosomal accessory protein 2 [Source:HGNC Symbol;Acc:18305] zzz999 231 AKR1B1 aldo-keto reductase family 1, member B1 (aldose reductase) [Source:HGNC Symbol;Acc:381] T 5360 PLTP phospholipid transfer protein [Source:HGNC Symbol;Acc:9093] zzz999 55890 GPRC5C G protein-coupled receptor, family C, group 5, member C [Source:HGNC Symbol;Acc:13309] zzz999 1534 CYB561 cytochrome b-561 [Source:HGNC Symbol;Acc:2571] T 8843 GPR109B G protein-coupled receptor 109B [Source:HGNC Symbol;Acc:16824] zzz999 90 ACVR1 activin A receptor, type I [Source:HGNC Symbol;Acc:171] zzz999 84061 MAGT1 magnesium transporter 1 [Source:HGNC Symbol;Acc:28880] T 10491 CRTAP cartilage associated protein [Source:HGNC Symbol;Acc:2379] T 389 RHOC ras homolog gene family, member C [Source:HGNC Symbol;Acc:669] zzz999 29937 NENF neuron derived neurotrophic factor [Source:HGNC Symbol;Acc:30384] zzz999

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